Please find the program of the 2016 course below. We will provide lunch and snacks in the coffee breaks for you and will pay for the boat ride on Thursday.


You can find information about Wifi access and other practical issues here.


Wednesday, August 10th - Introduction / Single Subject Analysis /Troubleshooting

Time

Title

Type

Lecturer

9:00 - 9:30

optional - Unix Tutorial for FreeSurfer Users

talk/tutorial

Allison Stevens

9:30 - 9:45

optional - Intro to FreeSurfer Jargon

talk

Allison Stevens & Lilla Zollei

9:45 - 10:00

break

10:00 - 10:30

Introduction to Freesurfer

talk

Emily Lindemer

10:30 - 11:30

Analyzing the Individual Subject

talk

Emily Lindemer

11:30 - 11:45

Freeview demonstration

demo

Allison Stevens

11:45 - 12:15

Interaction with Individual Subject Data Tutorial

tutorial

staff

12:15 - 1:15

Lunch

1:15 - 1:45

Interaction with Individual Subject Data Tutorial

tutorial

staff

1:45 - 2:30

FreeSurfer Troubleshooting

talk

Allison Stevens

2:30 - 2:45

Freeview Troubleshooting demonstration

demo

Allison Stevens

2:45 - 3:05

break

3:05 - 4:05

Troubleshooting Tutorial

tutorial

staff

4:05 - 5:05

Quality Checking a Recon

demo

Allison Stevens

5:05 - 5:45

NRU - A high resolution in vivo atlas of the human brain's serotonin system

talk

Vincent Beliveau

In the evening we will have a networking event at 18:00 at Noerrebro Bryghus (Ryesgade 3, 2200 København N, http://www.noerrebrobryghus.dk/) where you can mingle with the FreeSurfer lecturers. You'll have to pay for your own food and drinks there though.

Thursday, August 11th - Group Analysis / ROI Analysis / Longitudinal

Time

Title

Type

Lecturer

9:00 - 9:30

Surface-based Analysis: Intersubject Smoothing & Registration

talk

Lilla Zollei

9:30 - 10:20

Group Analysis

talk

Emily Lindemer

10:20 - 10:40

break

10:40 - 11:40

Group Analysis Tutorial

tutorial

staff

11:40 - 12:00

Multiple Comparisons

talk

Emily Lindemer

12:00 - 1:00

Lunch

1:00 - 1:20

Multiple Comparisons Tutorial

tutorial

staff

1:20 - 1:30

QDEC demonstration

demo

Martin Reuter

1:30 - 2:00

QDEC Tutorial

tutorial

staff

2:00 - 2:30

ROI Analysis

talk

Martin Reuter

2:30 - 2:50

break

2:50 - 3:20

ROI Analysis Tutorial

tutorial

staff

3:20 - 3:50

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Martin Reuter

3:50 - 4:30

Longitudinal Tutorial

tutorial

staff

4:30 - 5:30

NRU - Multivariate Analysis of in vivo PET data using Partial Least Squares

talk

Martin Nørgaard

On the second evening we have arranged for a guided sightseeing tour of Copenhagen by boat. The tour will start at 18:30 at Christianshavns Torv (next to the Christianshavn Metro station) and will last for approximately one hour. The end point of the tour will be Papirøen where you can visit Copenhagen Street Food (http://copenhagenstreetfood.dk/en/) and buy yourself dinner there.

Friday, August 12th - Multimodal / Diffusion / Future Directions

Time

Title

Type

Lecturer

9:00 - 10:00

Multi-Modal Integration

talk

Martin Reuter

10:00 - 11:00

Multi-Modal Integration Tutorial

tutorial

staff

11:00 - 11:15

break

11:15 - 12:00

Introduction to Diffusion MRI

talk

Lilla Zollei

12:00 - 1:00

Group photo & Lunch

1:00 - 1:40

Diffusion Tutorial

tutorial

staff

1:40 - 2:30

TRActs Constrained by UnderLying Anatomy (TRACULA)

talk

Lilla Zollei

2:30 - 3:10

Tracula Tutorial

tutorial

staff

3:10 - 3:15

Evaluation

3:15 - 3:30

break

3:30 - 4:00

optional technical talk - Registration Methods

talk

Lilla Zollei

4:00 - 4:30

Future Directions

talk

Emily Lindemer

4:30 - 5:00

Question and Answer Session (Answers to online questions here), FsQuiz

talk

staff


Throughout the course you also may post questions here (anonymous or not).